GM

Gmx Vmd Mcp

Developer Tools
21
GitHub Stars

MCP service for GROMACS and VMD molecular dynamics simulations and visualization

Installation

⭐ Recommended{{PATH_TO_UV}}
{{PATH_TO_UV}} --directory {PATH_TO_SRC}/mcp-gmx-vmd run mcp run mcp_server.py
View configuration snippet
{
  "mcpServers": {
    "gmx_vmd": {
      "command": "{{PATH_TO_UV}}",
      "args": [
        "--directory",
        "{PATH_TO_SRC}/mcp-gmx-vmd",
        "run",
        "mcp",
        "run",
        "mcp_server.py"
      ],
      "env": {
        "PYTHONPATH": "{PATH_TO_SRC}/mcp-gmx-vmd",
        "MCP_DEBUG": "1",
        "PYTHONUNBUFFERED": "1"
      }
    }
  }
}

💡 Tip: Make sure you have the appropriate package manager installed. Refer to the official documentation for detailed installation instructions.

Compatibility Matrix

Filter:

Cursor

STDIO
stdio:From mcp.so (unverified)

Claude Desktop

STDIO
stdio:From mcp.so (unverified)

MCP Compatible

STDIO
stdio:From mcp.so (unverified)
Verified - Tested by community
Unverified - Not yet tested
⚡ STDIO🌊 SSE🌐 HTTP

Server Information

License:MIT
Classification:active
Source:Data aggregated from public MCP directories

Quick Stats

Transports:
STDIO
Compatible Clients:3
Install Methods:1

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